STRINGSTRING
PITG_20233 protein (Phytophthora infestans) - STRING interaction network
"PITG_20233" - Voltage-gated Ion Channel in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_20233Voltage-gated Ion Channel (VIC) Superfamily (2056 aa)    
Predicted Functional Partners:
PITG_12115
Calmodulin-like protein (849 aa)
       
  0.774
PITG_02011
Calcineurin subunit B, putative (484 aa)
       
  0.769
PITG_12536
Putative uncharacterized protein (466 aa)
       
  0.722
PITG_21220
Rab28 family GTPase, putative (235 aa)
         
  0.661
PITG_17136
Rab8 family GTPase, putative (207 aa)
         
  0.661
PITG_06328
Rab8 family GTPase, putative (475 aa)
         
  0.661
PITG_03644
Rab8 family GTPase, putative (202 aa)
         
  0.661
PITG_01040
Ras family GTPase, putative (226 aa)
         
  0.661
PITG_21827
Rab11 family GTPase, putative (218 aa)
       
    0.659
PITG_17461
Rab11 family GTPase, putative (365 aa)
       
    0.659
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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