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PITG_20274 protein (Phytophthora infestans) - STRING interaction network
"PITG_20274" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_20274Putative uncharacterized protein; Probable pre-rRNA processing protein involved in ribosome biogenesis (340 aa)    
Predicted Functional Partners:
PITG_05935
DEAD/DEAH box RNA helicase, putative (823 aa)
     
      0.477
PITG_13669
Serine/threonine protein kinase (681 aa)
       
      0.457
PITG_11417
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, putative (274 aa)
       
      0.457
PITG_10969
Pre-mRNA-processing-splicing factor 8 (2320 aa)
       
      0.457
PITG_03156
Pre-rRNA-processing protein TSR1 (829 aa)
     
   
  0.424
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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