STRINGSTRING
PITG_20527 protein (Phytophthora infestans) - STRING interaction network
"PITG_20527" - DNA polymerase in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_20527DNA polymerase (1609 aa)    
Predicted Functional Partners:
PITG_16698
DNA polymerase alpha/epsilon subunit B, putative (458 aa)
     
  0.993
PITG_16691
DNA polymerase alpha/epsilon subunit B, putative (473 aa)
     
  0.993
PITG_05585
DNA polymerase subunit alpha B, putative; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (624 aa)
     
  0.960
PITG_14397
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
   
  0.953
PITG_02054
DNA primase (428 aa)
     
  0.935
PITG_15505
DNA polymerase (2403 aa)
     
0.927
PITG_04709
DNA ligase (3896 aa)
     
  0.917
PITG_09400
Pyruvate kinase (506 aa)
     
 
  0.912
PITG_09394
Pyruvate kinase (457 aa)
     
 
  0.912
PITG_09393
Pyruvate kinase (466 aa)
     
 
  0.912
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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