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PITG_20688 protein (Phytophthora infestans) - STRING interaction network
"PITG_20688" - mRNA turnover protein 4 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_20688mRNA turnover protein 4 (234 aa)    
Predicted Functional Partners:
PITG_15697
60S ribosomal protein L11, putative (133 aa)
   
  0.996
PITG_09345
40S ribosomal protein S5-2 (196 aa)
   
  0.996
PITG_08959
40S ribosomal protein S3-3 (246 aa)
   
  0.996
PITG_06237
60S ribosomal protein L8, putative (256 aa)
   
  0.996
PITG_03178
60S ribosomal protein L9 (189 aa)
   
  0.996
PITG_02694
60S ribosomal protein L23a (150 aa)
   
  0.996
PITG_01943
60S ribosomal protein L23 (141 aa)
   
  0.996
PITG_18054
50S ribosomal protein L7/L12, putative (178 aa)
   
  0.996
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
  0.995
PITG_19121
60S ribosomal protein L10 (208 aa)
   
  0.995
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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