STRINGSTRING
PITG_21350 protein (Phytophthora infestans) - STRING interaction network
"PITG_21350" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_21350Putative uncharacterized protein (445 aa)    
Predicted Functional Partners:
PITG_09475
Putative uncharacterized protein (236 aa)
       
      0.895
PITG_05376
Mitogen-activated protein kinase organizer, putative (310 aa)
     
 
  0.882
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
 
  0.882
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
      0.874
PITG_05782
Putative uncharacterized protein (363 aa)
       
      0.511
PITG_03564
Putative uncharacterized protein; Phosphodiesterase responsible for the U6 snRNA 3’ end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA (235 aa)
       
      0.511
PITG_03345
Peptidyl-prolyl cis-trans isomerase E, putative (117 aa)
       
      0.511
PITG_17157
Putative uncharacterized protein (286 aa)
     
      0.456
PITG_10600
Putative uncharacterized protein (373 aa)
     
      0.456
PITG_08932
Putative uncharacterized protein (382 aa)
     
      0.456
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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