STRINGSTRING
PITG_21398 protein (Phytophthora infestans) - STRING interaction network
"PITG_21398" - DEAD/DEAH box RNA helicase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_21398DEAD/DEAH box RNA helicase, putative (1095 aa)    
Predicted Functional Partners:
PITG_02564
Exosome complex exonuclease RRP6-like protein (1465 aa)
     
  0.816
PITG_21601
Putative uncharacterized protein (1564 aa)
     
  0.770
PITG_03206
Putative uncharacterized protein (1539 aa)
     
  0.770
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
     
  0.737
PITG_09374
Putative uncharacterized protein (975 aa)
     
    0.736
PITG_00748
Putative uncharacterized protein (2066 aa)
     
 
  0.712
PITG_03818
U3 small nucleolar RNA-associated protein, putative (913 aa)
     
    0.707
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
 
  0.681
PITG_17106
Putative uncharacterized protein (171 aa)
     
  0.672
PITG_14853
Exosome complex exonuclease MTR3-like protein (252 aa)
     
  0.672
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (10%) [HD]