STRINGSTRING
PITG_21401 protein (Phytophthora infestans) - STRING interaction network
"PITG_21401" - RNA methyltransferase in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_21401RNA methyltransferase (545 aa)    
Predicted Functional Partners:
PITG_08996
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.722
PITG_03308
Putative uncharacterized protein (566 aa)
     
        0.712
PITG_18014
Putative uncharacterized protein (1229 aa)
     
        0.695
PITG_00165
Putative uncharacterized protein (340 aa)
     
        0.659
PITG_12932
Putative uncharacterized protein (866 aa)
     
        0.653
PITG_12931
Putative uncharacterized protein (1003 aa)
     
        0.653
PITG_03156
Pre-rRNA-processing protein TSR1 (829 aa)
     
        0.642
PITG_15740
Putative uncharacterized protein (497 aa)
     
 
  0.636
PITG_02752
Ribosomal RNA methyltransferase nop2-like protein (645 aa)
     
 
  0.636
PITG_03452
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (756 aa)
     
        0.636
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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