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PITG_22023 protein (Phytophthora infestans) - STRING interaction network
"PITG_22023" - U5 small nuclear ribonucleoprotein, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_22023U5 small nuclear ribonucleoprotein, putative (379 aa)    
Predicted Functional Partners:
PITG_10969
Pre-mRNA-processing-splicing factor 8 (2320 aa)
     
  0.977
PITG_09956
Pre-mRNA-processing factor, putative (961 aa)
     
  0.954
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
     
  0.953
PITG_11158
Pre-mRNA-splicing factor SYF1-like protein (887 aa)
     
  0.939
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
  0.934
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
  0.934
PITG_04395
Pre-mRNA-processing protein, putative (495 aa)
     
  0.923
PITG_09475
Putative uncharacterized protein (236 aa)
       
  0.909
PITG_15653
Small nuclear ribonucleoprotein G (64 aa)
       
  0.895
PITG_03117
U4/U6 small nuclear ribonucleoprotein Prp3, putative (620 aa)
     
  0.893
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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