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PITG_22541 protein (Phytophthora infestans) - STRING interaction network
"PITG_22541" - 60S ribosomal export protein NMD3, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_2254160S ribosomal export protein NMD3, putative (339 aa)    
Predicted Functional Partners:
PITG_12107
Putative uncharacterized protein (315 aa)
     
 
  0.972
PITG_11198
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (664 aa)
     
 
  0.972
PITG_17404
Guanine nucleotide-binding protein (589 aa)
     
 
  0.963
PITG_13380
Guanine nucleotide-binding protein-like 3 (583 aa)
     
 
  0.963
PITG_19993
GMP synthase [glutamine-hydrolyzing], putative (528 aa)
     
        0.956
PITG_19656
GMP synthase [glutamine-hydrolyzing], putative (443 aa)
     
        0.956
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
   
  0.952
PITG_03452
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (756 aa)
     
   
  0.948
PITG_00165
Putative uncharacterized protein (340 aa)
     
   
  0.945
PITG_18755
SDA1 family protein (594 aa)
     
 
  0.937
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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