STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ99451.13-oxoacyl-[acyl-carrier protein] reductase. (90 aa)    
Predicted Functional Partners:
SEQ09896.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.918
SEP56213.1
Glutamate synthase (NADH) large subunit.
    
  0.787
SEQ52119.1
Glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase.
    
 0.686
SEQ99486.1
Lactonase, 7-bladed beta-propeller.
       0.601
SEQ99530.1
Uncharacterized conserved protein GlcG, DUF336 family.
       0.487
SEP57010.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
 0.443
SEQ80941.1
Cytochrome P450.
   
 0.443
Your Current Organism:
Lewinella agarilytica
NCBI taxonomy Id: 478744
Other names: DSM 24740, JBRI 2009, JCM 14216, KCTC 12774, L. agarilytica, Lewinella agarilytica Lee 2007, strain SST-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.