STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV06855.1Response regulator containing a CheY-like receiver domain and an HD-GYP domain; PFAM: HD domain. (378 aa)    
Predicted Functional Partners:
ACV06856.1
HD-GYP domain-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
 
  
 0.956
ACV06857.1
Hypothetical protein.
       0.757
ACV06858.1
TIGRFAM: anti-sigma factor, TIGR02949 family.
 
     0.645
ACV05902.1
PFAM: Glycosyl transferase family 2.
 
    0.593
ACV05911.1
Predicted phosphosugar isomerase; PFAM: Bacterial phospho-glucose isomerase C-terminal region; SIS domain.
  
     0.581
ACV05122.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.575
ACV06859.1
RNA polymerase, sigma subunit, ECF family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.573
ACV06664.1
PFAM: DivIVA protein.
  
     0.520
ACV05968.1
TIGRFAM: rod shape-determining protein MreD.
  
     0.519
ACV05893.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
 
 0.513
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.