STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3506Threonine 3-dehydrogenase. (331 aa)    
Predicted Functional Partners:
AV274_3045
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.960
AV274_1309
40S ribosomal protein S19e.
   
 0.954
AV274_3765
40S ribosomal protein S29.
  
 0.948
AV274_1100
Ribosomal protein S29.
  
 0.948
AV274_0217
Ribosomal protein S15Aa; Belongs to the universal ribosomal protein uS8 family.
   
 0.945
AV274_4569
Ribosomal protein S15Aa; Belongs to the universal ribosomal protein uS8 family.
   
 0.945
AV274_6074
40S ribosomal protein S10.
   
 0.943
AV274_5046
40S ribosomal protein S10.
   
 0.943
AV274_5757
RS23, ribosomal protein 23 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS12 family.
   
 0.942
AV274_4759
Ribosomal protein 23 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS12 family.
   
 0.942
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.