STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_1666DNA repair protein RAD51. (230 aa)    
Predicted Functional Partners:
AV274_4960
ATP-dependent DNA helicase MPH1.
   
 0.991
AV274_5617
Breast cancer type 2 susceptibility protein.
   
 0.955
AV274_0182
DNA repair protein XRCC3-like protein.
  
 
0.955
AV274_2115
RAD52, DNA repair and recombination protein.
    
 0.927
AV274_5787
Replication protein A 70 kDa DNA-binding subunit.
  
 0.916
AV274_2429
Replication protein A 70 kDa DNA-binding subunit.
  
 0.916
AV274_0144
MUS81, Subunit of structure-specific Mms4p-Mus81p endonuclease.
   
 0.916
AV274_5172
MRE11, DNA repair exonuclease.
  
 0.914
AV274_2264
RECA_2 domain-containing protein.
  
0.908
AV274_1952
DNA repair protein RAD51.
  
0.908
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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