STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_2148Glutamate--cysteine ligase catalytic subunit. (649 aa)    
Predicted Functional Partners:
AV274_2096
Aldo-keto reductase.
   
 0.954
AV274_1529
ATP-dependent RNA helicase DHX35.
   
 0.954
AV274_1756
N-acetylneuraminate lyase; Belongs to the DapA family.
   
 0.954
AV274_3750
Glutathione synthetase.
   
 0.927
AV274_5631
Aspartate aminotransferase.
     
 0.795
AV274_5155
Glutamine synthetase; Belongs to the glutamine synthetase family.
     
 0.792
AV274_5797
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
     
 0.786
AV274_5931
Aminopeptidase.
     
 0.785
AV274_0208
Aminopeptidase.
     
 0.785
AV274_4619
Succinate-semialdehyde dehydrogenase.
   
 
 0.768
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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