STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_0665PHB domain-containing protein. (332 aa)    
Predicted Functional Partners:
AV274_5487
ATP-dependent zinc metalloprotease YME1.
  
 0.882
AV274_2726
AAA domain-containing protein.
  
 0.882
AV274_3967
AAA-type ATPase.
  
 0.874
AV274_0839
ATP-dependent zinc metalloprotease FTSH 8; Belongs to the AAA ATPase family.
  
 0.874
AV274_0633
Peptidase M41, FtsH domain-containing protein; Belongs to the AAA ATPase family.
  
 0.874
AV274_4115
Presenilins-associated rhomboid-like protein.
  
 0.779
AV274_5580
3-oxoacyl-synthase.
  
 0.742
AV274_3597
DNA repair protein RadA.
  
 0.742
AV274_0150
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
  
 0.742
AV274_1003
Mitochondrial Processing Peptidase alpha subunit.
  
 0.742
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.