Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Namu_0050 | Namu_2633 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; 1- deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; KEGG: reh:H16_A0632 NADPH:quinone reductase or related Zn-dependent oxidoreductase. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase. | 0.733 |
Namu_0050 | Namu_3886 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; 1- deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; KEGG: reh:H16_A0632 NADPH:quinone reductase or related Zn-dependent oxidoreductase. | PFAM: Beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_II2348 polyketide synthase, putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.447 |
Namu_0050 | Namu_4238 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; 1- deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; KEGG: reh:H16_A0632 NADPH:quinone reductase or related Zn-dependent oxidoreductase. | KEGG: scl:sce0819 polyketide synthase; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: Beta-ketoacyl synthase; KR domain protein; Acyl transferase; short-chain dehydrogenase/reductase SDR. | 0.434 |
Namu_0109 | Namu_2633 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cti:RALTA_B0861 NADPH:quinone reductase; zinc- containing alcohol dehydrogenase superfamily. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase. | 0.770 |
Namu_0109 | Namu_3886 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cti:RALTA_B0861 NADPH:quinone reductase; zinc- containing alcohol dehydrogenase superfamily. | PFAM: Beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_II2348 polyketide synthase, putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.447 |
Namu_0109 | Namu_4238 | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cti:RALTA_B0861 NADPH:quinone reductase; zinc- containing alcohol dehydrogenase superfamily. | KEGG: scl:sce0819 polyketide synthase; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: Beta-ketoacyl synthase; KR domain protein; Acyl transferase; short-chain dehydrogenase/reductase SDR. | 0.434 |
Namu_2628 | Namu_2629 | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | 0.515 |
Namu_2628 | Namu_2630 | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | Hypothetical protein. | 0.487 |
Namu_2628 | Namu_2631 | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | KEGG: sse:Ssed_2789 hypothetical protein. | 0.487 |
Namu_2628 | Namu_2632 | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | KEGG: sde:Sde_2772 response regulator receiver domain-containing protein. | 0.595 |
Namu_2628 | Namu_2633 | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase. | 0.457 |
Namu_2629 | Namu_2628 | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | 0.515 |
Namu_2629 | Namu_2630 | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | Hypothetical protein. | 0.727 |
Namu_2629 | Namu_2631 | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | KEGG: sse:Ssed_2789 hypothetical protein. | 0.727 |
Namu_2629 | Namu_2632 | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | KEGG: sde:Sde_2772 response regulator receiver domain-containing protein. | 0.727 |
Namu_2629 | Namu_2633 | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase. | 0.702 |
Namu_2630 | Namu_2628 | Hypothetical protein. | Membrane protein-like protein; KEGG: rpt:Rpal_3822 hypothetical protein. | 0.487 |
Namu_2630 | Namu_2629 | Hypothetical protein. | PFAM: alpha/beta hydrolase fold; KEGG: oca:OCAR_4430 hydrolase. | 0.727 |
Namu_2630 | Namu_2631 | Hypothetical protein. | KEGG: sse:Ssed_2789 hypothetical protein. | 0.773 |
Namu_2630 | Namu_2632 | Hypothetical protein. | KEGG: sde:Sde_2772 response regulator receiver domain-containing protein. | 0.773 |
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