Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Namu_1670 | Namu_3306 | Namu_1670 | Namu_3306 | TIGRFAM: serine O-acetyltransferase; KEGG: met:M446_3579 serine O-acetyltransferase. | Serine acetyltransferase-like protein; KEGG: atc:AGR_C_2882 hypothetical protein. | 0.927 |
Namu_1670 | mshC | Namu_1670 | Namu_2780 | TIGRFAM: serine O-acetyltransferase; KEGG: met:M446_3579 serine O-acetyltransferase. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.711 |
Namu_1829 | Namu_2778 | Namu_1829 | Namu_2778 | Hypothetical protein. | Hypothetical protein. | 0.471 |
Namu_1829 | mca | Namu_1829 | Namu_4417 | Hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.775 |
Namu_1829 | mshB | Namu_1829 | Namu_4309 | Hypothetical protein. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.741 |
Namu_1829 | mshC | Namu_1829 | Namu_2780 | Hypothetical protein. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.700 |
Namu_1829 | mshD | Namu_1829 | Namu_4982 | Hypothetical protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.788 |
Namu_2776 | Namu_2777 | Namu_2776 | Namu_2777 | PFAM: Phosphoglycerate mutase; KEGG: mno:Mnod_1087 phosphoglycerate mutase. | Hypothetical protein. | 0.881 |
Namu_2776 | Namu_2778 | Namu_2776 | Namu_2778 | PFAM: Phosphoglycerate mutase; KEGG: mno:Mnod_1087 phosphoglycerate mutase. | Hypothetical protein. | 0.919 |
Namu_2776 | Namu_2779 | Namu_2776 | Namu_2779 | PFAM: Phosphoglycerate mutase; KEGG: mno:Mnod_1087 phosphoglycerate mutase. | Hypothetical protein. | 0.624 |
Namu_2776 | mshC | Namu_2776 | Namu_2780 | PFAM: Phosphoglycerate mutase; KEGG: mno:Mnod_1087 phosphoglycerate mutase. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.731 |
Namu_2777 | Namu_2776 | Namu_2777 | Namu_2776 | Hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: mno:Mnod_1087 phosphoglycerate mutase. | 0.881 |
Namu_2777 | Namu_2778 | Namu_2777 | Namu_2778 | Hypothetical protein. | Hypothetical protein. | 0.962 |
Namu_2777 | Namu_2779 | Namu_2777 | Namu_2779 | Hypothetical protein. | Hypothetical protein. | 0.717 |
Namu_2777 | mca | Namu_2777 | Namu_4417 | Hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.422 |
Namu_2777 | mshB | Namu_2777 | Namu_4309 | Hypothetical protein. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.680 |
Namu_2777 | mshC | Namu_2777 | Namu_2780 | Hypothetical protein. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.774 |
Namu_2777 | mshD | Namu_2777 | Namu_4982 | Hypothetical protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.425 |
Namu_2778 | Namu_1829 | Namu_2778 | Namu_1829 | Hypothetical protein. | Hypothetical protein. | 0.471 |
Namu_2778 | Namu_2776 | Namu_2778 | Namu_2776 | Hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: mno:Mnod_1087 phosphoglycerate mutase. | 0.919 |
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