STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_3717PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase. (322 aa)    
Predicted Functional Partners:
Namu_0050
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; 1- deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; KEGG: reh:H16_A0632 NADPH:quinone reductase or related Zn-dependent oxidoreductase.
  
     0.723
Namu_3715
Hypothetical protein; KEGG: kpe:KPK_2975 transporter, major facilitator family.
  
    0.523
Namu_3716
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
  
    0.523
Namu_3886
PFAM: Beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_II2348 polyketide synthase, putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.447
Namu_4238
KEGG: scl:sce0819 polyketide synthase; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: Beta-ketoacyl synthase; KR domain protein; Acyl transferase; short-chain dehydrogenase/reductase SDR.
 
 
 0.434
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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