Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sros_3561 | Sros_5259 | Sros_3561 | Sros_5259 | KEGG: aba:Acid345_2880 LmbE-like protein. | Hypothetical protein. | 0.664 |
Sros_3561 | Sros_5291 | Sros_3561 | Sros_5291 | KEGG: aba:Acid345_2880 LmbE-like protein. | Hypothetical protein. | 0.696 |
Sros_3561 | Sros_7324 | Sros_3561 | Sros_7324 | KEGG: aba:Acid345_2880 LmbE-like protein. | Hypothetical protein. | 0.700 |
Sros_3561 | mshC | Sros_3561 | Sros_5930 | KEGG: aba:Acid345_2880 LmbE-like protein. | Cysteine--tRNA ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.554 |
Sros_3561 | mshD | Sros_3561 | Sros_0893 | KEGG: aba:Acid345_2880 LmbE-like protein. | Hypothetical protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.793 |
Sros_5259 | Sros_3561 | Sros_5259 | Sros_3561 | Hypothetical protein. | KEGG: aba:Acid345_2880 LmbE-like protein. | 0.664 |
Sros_5259 | Sros_7629 | Sros_5259 | Sros_7629 | Hypothetical protein. | KEGG: eli:ELI_11725 hypothetical protein. | 0.533 |
Sros_5259 | mca | Sros_5259 | Sros_8537 | Hypothetical protein. | Conserved hypothetical protein LmbE; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.776 |
Sros_5259 | mshB | Sros_5259 | Sros_8449 | Hypothetical protein. | Conserved hypothetical protein LmbE; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.748 |
Sros_5259 | mshC | Sros_5259 | Sros_5930 | Hypothetical protein. | Cysteine--tRNA ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.670 |
Sros_5259 | mshD | Sros_5259 | Sros_0893 | Hypothetical protein. | Hypothetical protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.787 |
Sros_5291 | Sros_3561 | Sros_5291 | Sros_3561 | Hypothetical protein. | KEGG: aba:Acid345_2880 LmbE-like protein. | 0.696 |
Sros_5291 | Sros_7629 | Sros_5291 | Sros_7629 | Hypothetical protein. | KEGG: eli:ELI_11725 hypothetical protein. | 0.560 |
Sros_5291 | mca | Sros_5291 | Sros_8537 | Hypothetical protein. | Conserved hypothetical protein LmbE; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.776 |
Sros_5291 | mshB | Sros_5291 | Sros_8449 | Hypothetical protein. | Conserved hypothetical protein LmbE; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.756 |
Sros_5291 | mshC | Sros_5291 | Sros_5930 | Hypothetical protein. | Cysteine--tRNA ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.696 |
Sros_5291 | mshD | Sros_5291 | Sros_0893 | Hypothetical protein. | Hypothetical protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.787 |
Sros_7324 | Sros_3561 | Sros_7324 | Sros_3561 | Hypothetical protein. | KEGG: aba:Acid345_2880 LmbE-like protein. | 0.700 |
Sros_7324 | Sros_7629 | Sros_7324 | Sros_7629 | Hypothetical protein. | KEGG: eli:ELI_11725 hypothetical protein. | 0.594 |
Sros_7324 | mca | Sros_7324 | Sros_8537 | Hypothetical protein. | Conserved hypothetical protein LmbE; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.776 |
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