STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1503KEGG: mpo:Mpop_2993 aldose 1-epimerase. (317 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.994
Sros_7453
KEGG: xcv:XCV3214 beta-galactosidase.
 
 
 0.931
Sros_1261
KEGG: aca:ACP_3478 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.927
Sros_3535
KEGG: scl:sce7608 hypothetical protein; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.922
Sros_3372
Glucokinase; KEGG: sde:Sde_1018 glucokinase; Belongs to the bacterial glucokinase family.
    
 0.913
Sros_1287
KEGG: bha:BH3701 beta-galactosidase.
  
 
 0.912
Sros_7700
KEGG: bha:BH3701 beta-galactosidase.
  
 
 0.912
Sros_6587
Hypothetical protein; KEGG: aca:ACP_0066 alpha-galactosidase.
  
 
  0.908
Sros_2476
KEGG: ara:Arad_9637 transcriptional regulator protein.
    
 0.906
Sros_2701
KEGG: sfu:Sfum_1953 ROK family protein.
    
 0.906
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.