STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_2268KEGG: dac:Daci_4410 anti-sigma-factor antagonist. (126 aa)    
Predicted Functional Partners:
Sros_2267
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: xac:XAC1271 sigma-B negative effector.
 
 
 0.977
Sros_2266
KEGG: mch:Mchl_3342 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
   0.976
Sros_2264
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: aba:Acid345_2411 PAS/PAC sensor hybrid histidine kinase.
 
 
 0.935
Sros_2265
KEGG: sus:Acid_0531 histidine kinase.
 
  
 0.932
Sros_1009
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: sfu:Sfum_2453 serine phosphatase.
 
 
 0.905
Sros_2269
KEGG: sus:Acid_0527 anti-sigma-factor antagonist.
 
   
0.879
Sros_7544
Signal transduction histidine kinase-like protein; KEGG: bra:BRADO5752 sensor histidine kinase.
 
 
 0.841
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
 
  
 0.652
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
 
  
 0.642
Sros_8460
KEGG: mag:amb3537 serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.604
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.