STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3493KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component. (316 aa)    
Predicted Functional Partners:
Sros_3495
KEGG: csa:Csal_2610 extracellular solute-binding protein, family 1.
 
 
 0.965
Sros_3494
KEGG: csa:Csal_2611 binding-protein-dependent transport systems inner membrane component.
 
 0.963
Sros_3490
KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 0.956
Sros_6516
KEGG: ret:RHE_PE00356 sugar ABC transporter, ATP- binding protein; Belongs to the ABC transporter superfamily.
 
 0.881
Sros_3350
ABC-type sugar transport systems ATPase components-like protein; KEGG: vha:VIBHAR_06399 hypothetical protein; Belongs to the ABC transporter superfamily.
 
 0.863
Sros_5739
KEGG: bra:BRADO6023 ABC transporter permease.
 
 0.845
Sros_2193
KEGG: smd:Smed_0187 binding-protein-dependent transport systems inner membrane component.
 
 0.840
Sros_1501
KEGG: smd:Smed_0187 binding-protein-dependent transport systems inner membrane component.
 
 0.834
Sros_3074
KEGG: cvi:CV_0261 sugar ABC transporter permease protein.
 
 0.829
Sros_8235
KEGG: mlo:mlr7001 ABC transporter, permease protein.
 
 0.828
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.