STRINGSTRING
Sros_3595 protein (Streptosporangium roseum) - STRING interaction network
"Sros_3595" - KEGG: hypothetical protein in Streptosporangium roseum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3595KEGG- hypothetical protein (403 aa)    
Predicted Functional Partners:
Sros_2282
KEGG- dal-Dalk_1491 hypothetical protein (333 aa)
   
          0.484
Sros_0097
annotation not available (407 aa)
   
          0.450
Sros_0186
Membrane protein-like protein; KEGG- baa-BA_2274 hypothetical protein (304 aa)
   
          0.437
Sros_6679
Uncharacterized protein; KEGG- scl-sce2632 calcineurin-like phosphoesterase family protein (502 aa)
   
          0.413
Sros_3392
Probable membrane transporter protein; KEGG- rpb-RPB_1485 hypothetical protein (243 aa)
   
          0.407
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum, Streptosporangium roseum DSM 43021, Streptosporangium roseum DSM43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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