STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3595KEGG: hypothetical protein. (403 aa)    
Predicted Functional Partners:
Sros_3784
Glycoprotein endo-alpha-1,2-mannosidase; KEGG: hypothetical protein.
  
     0.601
Sros_3286
KEGG: hypothetical protein.
  
     0.481
Sros_7489
Hypothetical protein; KEGG: sus:Acid_3147 peptidase domain-containing protein.
  
     0.464
Sros_0218
KEGG: vfm:VFMJ11_A0700 spermine/spermidine acetyltransferase.
  
     0.447
Sros_9025
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: swi:Swit_2098 luciferase family protein.
  
     0.418
Sros_5427
Hypothetical protein; KEGG: GK24882 gene product from transcript GK24882- RA.
  
     0.417
Sros_2399
KEGG: leucine rich repeat protein.
  
     0.413
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.