Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sros_2200 | Sros_2423 | KEGG: scl:sce3255 hypothetical protein. | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | 0.470 |
Sros_2200 | Sros_3766 | KEGG: scl:sce3255 hypothetical protein. | KEGG: dde:Dde_1609 amino acid adenylation. | 0.889 |
Sros_2200 | Sros_3767 | KEGG: scl:sce3255 hypothetical protein. | KEGG: pfl:PFL_3492 pyochelin synthetase F. | 0.983 |
Sros_2200 | Sros_8815 | KEGG: scl:sce3255 hypothetical protein. | Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase. | 0.985 |
Sros_2422 | Sros_2423 | KEGG: bxe:Bxe_B0518 hypothetical protein. | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | 0.875 |
Sros_2422 | Sros_3766 | KEGG: bxe:Bxe_B0518 hypothetical protein. | KEGG: dde:Dde_1609 amino acid adenylation. | 0.887 |
Sros_2422 | Sros_3767 | KEGG: bxe:Bxe_B0518 hypothetical protein. | KEGG: pfl:PFL_3492 pyochelin synthetase F. | 0.981 |
Sros_2422 | Sros_8815 | KEGG: bxe:Bxe_B0518 hypothetical protein. | Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase. | 0.985 |
Sros_2423 | Sros_2200 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: scl:sce3255 hypothetical protein. | 0.470 |
Sros_2423 | Sros_2422 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: bxe:Bxe_B0518 hypothetical protein. | 0.875 |
Sros_2423 | Sros_3469 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: bbt:BBta_4111 hypothetical protein. | 0.470 |
Sros_2423 | Sros_3766 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: dde:Dde_1609 amino acid adenylation. | 0.998 |
Sros_2423 | Sros_3767 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: pfl:PFL_3492 pyochelin synthetase F. | 0.999 |
Sros_2423 | Sros_5581 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: bbt:BBta_4111 hypothetical protein. | 0.470 |
Sros_2423 | Sros_6555 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: bbt:BBta_4111 hypothetical protein. | 0.470 |
Sros_2423 | Sros_6841 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: bvi:Bcep1808_1578 MbtH domain-containing protein. | 0.470 |
Sros_2423 | Sros_6969 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | KEGG: bbt:BBta_4111 hypothetical protein. | 0.470 |
Sros_2423 | Sros_8815 | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase. | 0.978 |
Sros_3469 | Sros_2423 | KEGG: bbt:BBta_4111 hypothetical protein. | KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase. | 0.470 |
Sros_3469 | Sros_3766 | KEGG: bbt:BBta_4111 hypothetical protein. | KEGG: dde:Dde_1609 amino acid adenylation. | 0.887 |
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