STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3767KEGG: pfl:PFL_3492 pyochelin synthetase F. (1835 aa)    
Predicted Functional Partners:
Sros_2423
KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase.
 
0.999
Sros_8815
Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase.
 
 0.998
Sros_3766
KEGG: dde:Dde_1609 amino acid adenylation.
 
  
0.985
Sros_2200
KEGG: scl:sce3255 hypothetical protein.
 
 
 0.983
Sros_6841
KEGG: bvi:Bcep1808_1578 MbtH domain-containing protein.
 
 
 0.983
Sros_6969
KEGG: bbt:BBta_4111 hypothetical protein.
 
 
 0.983
Sros_2422
KEGG: bxe:Bxe_B0518 hypothetical protein.
  
 
 0.981
Sros_3469
KEGG: bbt:BBta_4111 hypothetical protein.
  
 
 0.981
Sros_5581
KEGG: bbt:BBta_4111 hypothetical protein.
  
 
 0.981
Sros_6555
KEGG: bbt:BBta_4111 hypothetical protein.
  
 
 0.981
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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