STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_3874KEGG: mno:Mnod_8293 hypothetical protein. (120 aa)    
Predicted Functional Partners:
Sros_3873
KEGG: bbt:BBta_0108 organic hydroperoxide resistance transcriptional regulator.
       0.773
Sros_3872
KEGG: cti:RALTA_B0167 organic hydroperoxide resistance protein OhrB, OsmC family.
       0.550
Sros_8843
Hypothetical protein; KEGG: geo:Geob_0328 glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.475
Sros_8396
KEGG: mxa:MXAN_1877 hypothetical protein.
  
     0.465
Sros_1136
Membrane protein-like protein; KEGG: hne:HNE_0896 hypothetical protein.
 
     0.460
Sros_1878
KEGG: pae:PA1419 putative transporter; Belongs to the purine-cytosine permease (2.A.39) family.
  
     0.456
Sros_2054
KEGG: cvi:CV_0164 DNA alkylation repair enzyme.
 
     0.416
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.