STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4101Hypothetical protein. (192 aa)    
Predicted Functional Partners:
Sros_4801
KEGG: afw:Anae109_0827 hypothetical protein.
 
  
 0.826
Sros_3528
KEGG: afw:Anae109_0827 hypothetical protein.
 
  
 0.825
Sros_2667
KEGG: rsq:Rsph17025_3605 hypothetical protein.
  
  
 0.823
Sros_3744
Phosphoribosyltransferase-like protein; KEGG: mno:Mnod_2322 erythromycin esterase.
  
    0.781
Sros_1164
KEGG: pag:PLES_14721 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.775
Sros_5902
Zn-dependent protease-like protein; KEGG: aeh:Mlg_1368 peptidase M50; Belongs to the peptidase M50B family.
  
    0.762
Sros_1925
KEGG: sus:Acid_2929 major facilitator transporter.
   
    0.754
Sros_5440
KEGG: sus:Acid_2929 major facilitator transporter.
   
    0.754
Sros_5057
KEGG: swi:Swit_1817 erythromycin esterase.
   
    0.687
Sros_8032
Hypothetical protein.
  
     0.632
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.