STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4323KEGG: eba:ebA5761 putative oxidoreductase, zinc- containing alcohol dehydrogenase. (333 aa)    
Predicted Functional Partners:
Sros_3963
NADPH:quinone reductase; KEGG: scl:sce1535 alcohol dehydrogenase.
  
     0.752
Sros_4234
NADPH:quinone reductase and related Zn-dependent oxidoreductase-like protein; KEGG: scl:sce1535 alcohol dehydrogenase.
  
     0.667
Sros_7645
Oxidoreductase; KEGG: mlo:mlr3236 oxidoreductase.
  
     0.622
Sros_4322
KEGG: bxe:Bxe_B0714 ArsR family transcriptional regulator.
       0.548
Sros_4324
KEGG: scl:sce2245 hypothetical protein.
       0.501
Sros_0976
KEGG: pzu:PHZ_c1983 alcohol dehydrogenase, zinc- containing.
 
    0.466
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.