STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5143KEGG: mrd:Mrad2831_5929 XRE family transcriptional regulator. (192 aa)    
Predicted Functional Partners:
Sros_4623
Putative transcriptional regulator, XRE family; KEGG: ret:RHE_PE00372 hypothetical protein.
  
    0.674
Sros_5144
KEGG: bpy:Bphyt_4882 GCN5-related N- acetyltransferase.
  
    0.605
cobB-2
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
 
    0.490
Sros_4707
KEGG: bxe:Bxe_C0266 GntR family transcriptional regulator.
 
  
 0.433
Sros_2122
KEGG: swi:Swit_1674 GntR family transcriptional regulator.
 
  
 0.427
Sros_7925
Putative transcriptional regulator, XRE family; KEGG: rso:RSc1159 putative transcription regulator protein.
 
 
0.421
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.