STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_5745KEGG: csa:Csal_3168 putative transposase, IS891/IS1136/IS1341. (381 aa)    
Predicted Functional Partners:
Sros_5522
KEGG: pmr:PMI1001 IS element transposase.
 
  
 0.791
Sros_1692
Transposase; KEGG: noc:Noc_2686 transposase.
  
     0.773
Sros_7429
Transposase; KEGG: noc:Noc_2686 transposase.
  
     0.773
Sros_3796
KEGG: noc:Noc_0387 transposase IS200.
 
  
 0.768
Sros_6350
KEGG: noc:Noc_0387 transposase IS200.
 
  
 0.767
Sros_5746
KEGG: vei:Veis_2018 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.541
Sros_1893
KEGG: afr:AFE_1365 HNH endonuclease domain protein.
  
     0.408
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.