STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6167KEGG: bpy:Bphyt_0056 urease, beta subunit. (247 aa)    
Predicted Functional Partners:
ureC
Urease; KEGG: mpo:Mpop_5114 urease, alpha subunit.
 0.999
ureC-2
Urease; KEGG: hch:HCH_04523 urease subunit alpha.
 0.999
Sros_2768
KEGG: mex:Mext_1196 bifunctional urease subunit gamma/beta.
 
0.999
ureC-3
Urease; KEGG: aeh:Mlg_0184 urease subunit alpha.
 0.999
Sros_2714
Urease; KEGG: lhk:LHK_01036 urease, beta subunit.
 
0.996
Sros_2712
Urease; KEGG: pol:Bpro_1352 urease subunit gamma; Belongs to the urease gamma subunit family.
 
0.995
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 0.989
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.989
ureF
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.986
alc
Allantoicase; KEGG: scl:sce5877 putative bifunctional allantoicase/OHCU decarboxylase; Belongs to the allantoicase family.
 
  
  0.924
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.