Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sros_1159 | Sros_6278 | Response regulator receiver protein; KEGG: sus:Acid_1272 two component LuxR family transcriptional regulator. | KEGG: hypothetical protein. | 0.413 |
Sros_1159 | Sros_8620 | Response regulator receiver protein; KEGG: sus:Acid_1272 two component LuxR family transcriptional regulator. | KEGG: scl:sce5660 hypothetical protein. | 0.615 |
Sros_4149 | Sros_6278 | Hypothetical protein; KEGG: mno:Mnod_1207 cupin 2 conserved barrel domain protein. | KEGG: hypothetical protein. | 0.408 |
Sros_6278 | Sros_1159 | KEGG: hypothetical protein. | Response regulator receiver protein; KEGG: sus:Acid_1272 two component LuxR family transcriptional regulator. | 0.413 |
Sros_6278 | Sros_4149 | KEGG: hypothetical protein. | Hypothetical protein; KEGG: mno:Mnod_1207 cupin 2 conserved barrel domain protein. | 0.408 |
Sros_6278 | Sros_6279 | KEGG: hypothetical protein. | KEGG: mxa:MXAN_1276 glutamate-cysteine ligase, family 2. | 0.618 |
Sros_6278 | Sros_6947 | KEGG: hypothetical protein. | Hypothetical protein; KEGG: aca:ACP_1157 polyketide synthase peptide synthetase fusion protein. | 0.598 |
Sros_6278 | Sros_7214 | KEGG: hypothetical protein. | KEGG: swi:Swit_3995 hypothetical protein. | 0.411 |
Sros_6278 | Sros_7375 | KEGG: hypothetical protein. | Hypothetical protein; KEGG: aha:AHA_3487 ABC-type transport system, permease component. | 0.482 |
Sros_6278 | Sros_7532 | KEGG: hypothetical protein. | Hypothetical protein; KEGG: bid:Bind_1566 uridine kinase. | 0.448 |
Sros_6278 | Sros_7618 | KEGG: hypothetical protein. | KEGG: bja:bll0083 hypothetical protein. | 0.407 |
Sros_6278 | Sros_7624 | KEGG: hypothetical protein. | KEGG: scl:sce8284 hypothetical protein. | 0.452 |
Sros_6278 | Sros_8620 | KEGG: hypothetical protein. | KEGG: scl:sce5660 hypothetical protein. | 0.512 |
Sros_6279 | Sros_6278 | KEGG: mxa:MXAN_1276 glutamate-cysteine ligase, family 2. | KEGG: hypothetical protein. | 0.618 |
Sros_6947 | Sros_6278 | Hypothetical protein; KEGG: aca:ACP_1157 polyketide synthase peptide synthetase fusion protein. | KEGG: hypothetical protein. | 0.598 |
Sros_7214 | Sros_6278 | KEGG: swi:Swit_3995 hypothetical protein. | KEGG: hypothetical protein. | 0.411 |
Sros_7214 | Sros_7375 | KEGG: swi:Swit_3995 hypothetical protein. | Hypothetical protein; KEGG: aha:AHA_3487 ABC-type transport system, permease component. | 0.421 |
Sros_7375 | Sros_6278 | Hypothetical protein; KEGG: aha:AHA_3487 ABC-type transport system, permease component. | KEGG: hypothetical protein. | 0.482 |
Sros_7375 | Sros_7214 | Hypothetical protein; KEGG: aha:AHA_3487 ABC-type transport system, permease component. | KEGG: swi:Swit_3995 hypothetical protein. | 0.421 |
Sros_7375 | Sros_7624 | Hypothetical protein; KEGG: aha:AHA_3487 ABC-type transport system, permease component. | KEGG: scl:sce8284 hypothetical protein. | 0.404 |
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