STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6397Response regulator receiver protein; KEGG: bsu:BSU13250 hypothetical protein. (237 aa)    
Predicted Functional Partners:
Sros_6396
KEGG: gur:Gura_4294 integral membrane sensor signal transduction histidine kinase.
 0.995
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
  
 
0.936
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
  
 
0.936
Sros_6083
KEGG: dvm:DvMF_2541 multi-sensor signal transduction histidine kinase.
 
 0.890
Sros_0840
KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase.
 
 0.830
Sros_0960
KEGG: geo:Geob_3554 PAS/PAC sensor signal transduction histidine kinase.
 
 0.830
Sros_8878
KEGG: gme:Gmet_3382 heavy metal sensor signal transduction histidine kinase.
 
 0.830
Sros_0259
KEGG: sus:Acid_5033 integral membrane sensor signal transduction histidine kinase.
 
 0.827
Sros_0101
Signal transduction histidine kinase-like protein; KEGG: cti:RALTA_B2292 putative sensory histidine kinase in two-component regulatory system; signal peptide.
 
 0.825
Sros_9262
Signal transduction histidine kinase-like protein; KEGG: pca:Pcar_3082 two component sensor histidine kinase.
 
 0.824
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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