STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6412KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit. (656 aa)    
Predicted Functional Partners:
Sros_4192
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.997
Sros_1320
KEGG: ank:AnaeK_0260 carboxyl transferase.
 
 0.995
Sros_7058
KEGG: mxa:MXAN_1113 propionyl-CoA carboxylase, beta subunit.
 
 0.995
accD
Acetyl-CoA carboxylase alpha subunit-like protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 
 0.986
Sros_0567
KEGG: acetyl-coA carboxylase; K01959 pyruvate carboxylase subunit A.
 
 0.975
Sros_6413
KEGG: bph:Bphy_3561 propionyl-CoA carboxylase.
 0.975
Sros_6580
Acetyl-CoA carboxylase beta subunit-like protein; KEGG: acetyl-coA carboxylase; K01959 pyruvate carboxylase subunit A.
 
 0.974
Sros_7054
KEGG: bmn:BMA10247_1801 malonyl CoA-acyl carrier protein transacylase.
 
 
 0.961
fabH
Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
 
 0.959
Sros_6937
KEGG: eba:ebA3742 propionyl-CoA carboxylase beta subunit.
 
 0.956
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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