STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_6589KEGG: bps:BPSS2086 hypothetical protein. (436 aa)    
Predicted Functional Partners:
Sros_8139
Phosphorylase; KEGG: geo:Geob_0532 alpha-glucan phosphorylase.
  
 
 0.711
Sros_6587
Hypothetical protein; KEGG: aca:ACP_0066 alpha-galactosidase.
       0.599
Sros_6584
KEGG: mlo:mlr6435 ABC transporter sugar binding protein.
       0.596
Sros_6585
KEGG: bha:BH2725 lactose transport system (permease).
       0.596
Sros_6586
KEGG: rfr:Rfer_1101 binding-protein-dependent transport systems inner membrane component.
       0.596
Sros_6588
KEGG: jan:Jann_1282 LacI family transcription regulator.
       0.595
Sros_5639
KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
   
  
 0.550
Sros_6583
KEGG: mxa:MXAN_1570 aminotransferase, class V.
       0.522
Sros_1603
KEGG: aca:ACP_2720 4-alpha-D-((1->4)-alpha-D- glucano)trehalose trehalohydrolase.
  
  
 0.407
Sros_7533
Hypothetical protein; KEGG: dvl:Dvul_2047 isoamylase N-terminal domain- containing protein.
  
  
 0.407
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.