STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7591Chitinase-like protein; KEGG: sml:Smlt0682 chitinase A. (854 aa)    
Predicted Functional Partners:
Sros_6846
Chitinase; KEGG: hch:HCH_01137 chitinase.
 
 
 
0.919
Sros_1151
KEGG: hypothetical protein.
   
 
 0.875
Sros_1381
KEGG: ATPase, AAA family protein.
   
 
 0.875
Sros_6448
Hypothetical protein; KEGG: vesicular transport-associated repeat protein.
   
 
 0.875
Sros_6737
Hypothetical protein; KEGG: abo:ABO_1307 sensor histidine kinase/respose regulator.
   
 
 0.875
smc
Chromosome segregation SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.875
Sros_0140
Hypothetical protein.
    
 
 0.866
Sros_6105
KEGG: dia:Dtpsy_2041 hypothetical protein.
    
 
 0.866
Sros_3060
Beta-N-acetylhexosaminidase; KEGG: sde:Sde_3037 glycosyl hydrolase.
 
  
 0.793
Sros_7722
KEGG: cak:Caul_0293 beta-N-acetylhexosaminidase.
 
  
 0.762
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.