STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7910KEGG: msl:Msil_0872 alcohol dehydrogenase GroES domain protein. (302 aa)    
Predicted Functional Partners:
Sros_7645
Oxidoreductase; KEGG: mlo:mlr3236 oxidoreductase.
  
     0.755
Sros_2423
KEGG: mxa:MXAN_2798 polyketide/non-ribosomal peptide synthetase.
 
 
 0.541
Sros_0411
KEGG: rec:RHECIAT_CH0003225 putative benzoate transporter protein.
 
      0.530
Sros_8815
Polyketide synthase modules and related protein- like protein; KEGG: xau:Xaut_1008 beta-ketoacyl synthase.
 
 
 0.525
Sros_2429
KEGG: bma:BMAA1021 thiotemplate mechanism natural product synthetase.
 
 
 0.492
Sros_7912
Glucose/sorbosone dehydrogenase-like protein; KEGG: sde:Sde_0722 Crp/FNR family transcriptional regulator.
  
    0.486
Sros_7909
Hypothetical protein.
       0.481
Sros_7911
Conserved hypothetical protein; KEGG: sde:Sde_0722 Crp/FNR family transcriptional regulator.
       0.481
Sros_4286
KEGG: mxa:MXAN_4528 polyketide synthase.
 
 
 0.428
Sros_7506
KEGG: mno:Mnod_3306 alcohol dehydrogenase GroES domain protein.
 
  
 0.412
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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