STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8160KEGG: ank:AnaeK_4236 transcriptional regulator, MarR family. (153 aa)    
Predicted Functional Partners:
Sros_0350
KEGG: efe:EFER_2801 putative MarR-family regulatory protein.
  
     0.681
Sros_1741
KEGG: efe:EFER_2801 putative MarR-family regulatory protein.
  
     0.626
Sros_0820
KEGG: efe:EFER_2801 putative MarR-family regulatory protein.
  
     0.564
Sros_8161
KEGG: pfo:Pfl01_0570 small multidrug resistance protein.
       0.535
Sros_8164
KEGG: bsu:BSU38250 hypothetical protein.
 
     0.518
Sros_8162
Transporter; KEGG: pap:PSPA7_4733 transporter.
       0.429
Sros_8163
KEGG: rce:RC1_1684 guanine deaminase.
       0.427
Sros_2504
KEGG: met:M446_6592 TetR family transcriptional regulator.
  
     0.419
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.