STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8472KEGG: bsu:BSU04940 hypothetical protein. (830 aa)    
Predicted Functional Partners:
Sros_8471
Hypothetical protein; KEGG: bpm:BURPS1710b_1102 putative lipoprotein.
 
    0.961
Sros_8469
Cell wall-associated hydrolase (invasion- associated protein)-like protein; KEGG: bar:GBAA_pXO2_0007 NLP/P60 family protein, (pXO2-08).
 
  
 0.864
Sros_8473
ATPase involved in chromosome partitioning-like protein; KEGG: Hypothetical protein CBG02561.
 
     0.823
Sros_1695
KEGG: hypothetical protein.
 
  
 0.803
Sros_7331
Hypothetical protein; KEGG: sbp:Sbal223_2107 NERD domain protein.
 
  
 0.800
Sros_8470
Hypothetical protein.
       0.790
Sros_5968
KEGG: scl:sce1864 hypothetical protein.
  
     0.774
Sros_7091
Hypothetical protein.
  
     0.773
Sros_1868
KEGG: spe:Spro_1402 hypothetical protein.
  
     0.766
Sros_0383
KEGG: hypothetical protein.
  
     0.764
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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