STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8791KEGG: scl:sce0244 hypothetical protein. (621 aa)    
Predicted Functional Partners:
Sros_2842
H(+)-transporting two-sector ATPase; KEGG: mno:Mnod_7572 cation transporter.
  
 
 0.700
Sros_4696
H(+)-transporting two-sector ATPase; KEGG: psa:PST_1936 putative cation transporter.
  
 
 0.700
Sros_2826
KEGG: gme:Gmet_0066 Fmu, rRNA SAM-dependent methyltransferase:Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.618
Sros_1352
KEGG: ppr:PBPRA2203 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.614
Sros_8345
KEGG: scl:sce2941 molybdopterin-converting factor chain 2.
   
    0.526
Sros_2334
Hypothetical protein; KEGG: sfu:Sfum_2920 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.497
Sros_3192
KEGG: scl:sce4636 hypothetical protein.
  
     0.480
Sros_4679
KEGG: vesicular transport-associated repeat protein.
 
     0.474
Sros_1984
KEGG: afr:AFE_2849 serine protease, DO/DeqQ family.
 
     0.469
Sros_8792
Signal transduction histidine kinase-like protein; KEGG: scl:sce5432 putative two-component system sensor kinase.
  
    0.467
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.