STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Foxred2KEGG: Foxred2; FAD-dependent oxidoreductase domain containing 2. (532 aa)    
Predicted Functional Partners:
Sros_6566
KEGG: aca:ACP_3043 alkylhydroperoxide reductase C.
  
 
 0.624
Sros_7011
KEGG: scl:sce5600 hypothetical protein.
  
     0.612
Sros_3784
Glycoprotein endo-alpha-1,2-mannosidase; KEGG: hypothetical protein.
  
     0.595
Sros_7107
KEGG: hypothetical protein LOC686639.
  
    0.584
Sros_2358
Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
   
 0.579
Sros_7960
Hypothetical protein; KEGG: GK14994 gene product from transcript GK14994- RA.
 
  
 0.569
Sros_5603
KEGG: bar:GBAA2018 amine oxidase, flavin-containing.
  
   
 0.535
Protein
Protein; KEGG: predicted protein; K02183 calmodulin.
  
     0.521
Sros_2004
KEGG: psb:Psyr_0773 aryldialkylphosphatase.
  
     0.513
Sros_8300
KEGG: similar to CG9240 CG9240-PA; K09647 mitochondrial inner membrane protease subunit 1; Belongs to the peptidase S24 family.
  
     0.512
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.