STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_9211KEGG: hypothetical protein. (485 aa)    
Predicted Functional Partners:
Sros_7059
Hypothetical protein.
  
     0.605
nucS
Nuclease of the RecB family-like protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.453
Sros_0571
Fructose-2 6-bisphosphatase-like protein; KEGG: mex:Mext_0502 phosphoglycerate mutase.
  
 
   0.437
Sros_1386
Hypothetical protein.
  
     0.419
Sros_3533
KEGG: sme:SM_b20536 hypothetical protein.
  
     0.414
Sros_9212
KEGG: pol:Bpro_1703 alpha/beta hydrolase fold.
       0.406
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.