Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sros_0748 | Sros_5354 | KEGG: baa:BA_1595 hypothetical protein. | KEGG: bur:Bcep18194_A3935 EmrB/QacA family drug resistance transporter. | 0.737 |
Sros_0748 | Sros_9283 | KEGG: baa:BA_1595 hypothetical protein. | KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. | 0.726 |
Sros_5354 | Sros_0748 | KEGG: bur:Bcep18194_A3935 EmrB/QacA family drug resistance transporter. | KEGG: baa:BA_1595 hypothetical protein. | 0.737 |
Sros_5354 | Sros_9283 | KEGG: bur:Bcep18194_A3935 EmrB/QacA family drug resistance transporter. | KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. | 0.730 |
Sros_9283 | Sros_0748 | KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. | KEGG: baa:BA_1595 hypothetical protein. | 0.726 |
Sros_9283 | Sros_5354 | KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. | KEGG: bur:Bcep18194_A3935 EmrB/QacA family drug resistance transporter. | 0.730 |
Sros_9283 | Sros_9284 | KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. | KEGG: dat:HRM2_14980 transcriptional regulator (MarR family protein). | 0.556 |
Sros_9284 | Sros_9283 | KEGG: dat:HRM2_14980 transcriptional regulator (MarR family protein). | KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. | 0.556 |