STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_9336Gluconolactonase; KEGG: mlo:mll4328 gluconolactonase. (299 aa)    
Predicted Functional Partners:
Sros_3976
Gluconokinase; KEGG: afw:Anae109_0595 carbohydrate kinase.
    
 0.914
Sros_6518
Peroxiredoxin; KEGG: pmy:Pmen_3641 peroxiredoxin; Belongs to the glutathione peroxidase family.
    0.818
Sros_1503
KEGG: mpo:Mpop_2993 aldose 1-epimerase.
   
 0.722
Sros_9337
Putative transcriptional regulator, AsnC family; KEGG: mlo:mlr7283 transcriptional regulator.
       0.667
Sros_8215
KEGG: xca:xccb100_4271 phosphopyruvate hydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.498
Sros_5544
KEGG: sil:SPO2415 phytanoyl-CoA dioxygenase family protein.
  
    0.452
Sros_3496
KEGG: csa:Csal_0643 mannitol dehydrogenase-like protein.
 
   
 0.429
Sros_1497
KEGG: pol:Bpro_3962 mandelate racemase/muconate lactonizing enzyme.
 
  
 0.407
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.