STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1177PFAM: ROK family protein; KEGG: lbr:LVIS_2120 transcriptional regulator/sugar kinase. (318 aa)    
Predicted Functional Partners:
Caci_8114
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: tfu:Tfu_2489 putative phosphoenolpyruvate- dependent sugar phosphotransferase.
  
 
 0.909
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: sco:SCO1942 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.908
Caci_1836
PFAM: Aldose 1-epimerase; KEGG: nca:Noca_2454 aldose 1-epimerase.
    
 0.906
Caci_4369
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.906
Caci_8681
PFAM: Aldose 1-epimerase; KEGG: nca:Noca_2454 aldose 1-epimerase.
    
 0.906
Caci_7349
PFAM: glycoside hydrolase family 4; KEGG: sgr:SGR_4870 putative sugar hydrolase.
    
 0.903
Caci_0347
TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: sco:SCO3899 hypothetical protein.
     
  0.900
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.818
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.818
tal-3
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.818
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.