STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1474PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: sco:SCO2942 oxidoreductase. (570 aa)    
Predicted Functional Partners:
Caci_1475
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sco:SCO2941 hypothetical protein.
 
 
 0.974
Caci_1476
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sco:SCO2940 oxidoreductase.
 
 
 0.963
Caci_4733
TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_1261 aldehyde oxidase and xanthine dehydrogenase,molybdopterin binding.
 
 
 0.953
Caci_1873
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: nca:Noca_1491 xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 
 0.950
Caci_4735
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_1263 (2Fe-2S)-binding protein.
 
 0.950
Caci_1872
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: nca:Noca_1490 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.949
Caci_2734
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_3091 oxidoreductase, iron-sulphur binding subunit.
 
 
 0.922
Caci_2736
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_3093 xanthine dehydrogenase molybdopterin binding subunit.
 
 
 0.897
Caci_4732
PFAM: protein of unknown function DUF182; KEGG: fal:FRAAL3797 putative xanthine dehydrogenase.
 
  
 0.826
Caci_1880
PFAM: protein of unknown function DUF182; KEGG: sma:SAV_7506 xanthine dehydrogenase.
 
  
 0.824
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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