STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1595PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: sma:SAV_1753 alpha-mannosidase. (1062 aa)    
Predicted Functional Partners:
Caci_2258
Alpha-mannosidase; PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: sma:SAV_7277 alpha-mannosidase.
  
  
 
0.904
Caci_1594
PFAM: ROK family protein; KEGG: cms:CMS_1016 ROK family transcriptional regulator.
 
    0.835
Caci_1593
KEGG: sgr:SGR_882 hypothetical protein.
       0.694
Caci_1596
PFAM: Glycoside hydrolase family 42 domain protein; KEGG: cma:Cmaq_0463 hypothetical protein.
       0.610
Caci_2014
PFAM: extracellular solute-binding protein family 1; KEGG: cms:CMS_1015 putative extracellular solute- binding protein.
 
     0.610
Caci_1346
KEGG: stp:Strop_1435 hypothetical protein.
  
    0.597
Caci_2254
PFAM: extracellular solute-binding protein family 1; KEGG: saq:Sare_1080 extracellular solute-binding protein.
 
     0.515
Caci_7279
TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: sma:SAV_3574 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
    0.508
Caci_1601
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kra:Krad_0976 oxidoreductase domain- containing protein.
 
    0.492
Caci_2015
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_7278 putative integral membrane transport protein.
 
     0.449
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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