STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_2125PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_1767 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa)    
Predicted Functional Partners:
Caci_0797
PFAM: Aldehyde Dehydrogenase; KEGG: sco:SCO4912 aldehyde dehydrogenase.
 
    
0.919
Caci_2128
KEGG: reu:Reut_C6294 citrate synthase.
  
 
 0.847
Caci_2127
Glutaconate CoA-transferase; PFAM: coenzyme A transferase; KEGG: sen:SACE_3515 3-oxoadipate:succinyl-CoA transferase, B subunit.
  
 
 0.796
Caci_2126
PFAM: coenzyme A transferase; KEGG: afu:AF1199 glutaconate CoA-transferase, subunit A (GctA).
  
  
 0.791
Caci_1724
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: kra:Krad_4057 myo-inositol catabolism IolB domain-containing protein.
  
  
 0.413
Caci_1359
PFAM: Na+/solute symporter; KEGG: sco:SCO5229 permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.409
Caci_4491
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ace:Acel_1800 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
 
  
 0.400
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.