STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_3489PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: sma:SAV_5015 hypothetical protein. (541 aa)    
Predicted Functional Partners:
Caci_3490
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sco:SCO1047 integral membrane protein.
 
 
 
 0.876
Caci_6607
KEGG: sma:SAV_1927 integral membrane protein.
 
     0.538
Caci_6599
KEGG: sma:SAV_7336 integral membrane protein.
 
     0.531
Caci_6254
KEGG: sco:SCO6327 integral membrane protein.
 
     0.511
Caci_6591
TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: rha:RHA1_ro03757 SulP family sulfate transporter.
 
     0.500
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
 0.497
groL-2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
 0.497
Caci_8852
Amino acid/amide ABC transporter substrate- binding protein, HAAT family; KEGG: fra:Francci3_0852 hypothetical protein.
 
     0.494
Caci_6594
KEGG: sgr:SGR_5155 putative integral membrane protein.
 
     0.483
Caci_6598
KEGG: sma:SAV_1926 hypothetical protein.
 
    0.469
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.