Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_0055 | Caci_0344 | PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sma:SAV_4367 hypothetical protein. | KEGG: sco:SCO3902 integral membrane protein. | 0.482 |
Caci_0055 | Caci_3685 | PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sma:SAV_4367 hypothetical protein. | KEGG: mgi:Mflv_0993 hypothetical protein. | 0.551 |
Caci_0344 | Caci_0055 | KEGG: sco:SCO3902 integral membrane protein. | PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sma:SAV_4367 hypothetical protein. | 0.482 |
Caci_0344 | Caci_3685 | KEGG: sco:SCO3902 integral membrane protein. | KEGG: mgi:Mflv_0993 hypothetical protein. | 0.425 |
Caci_0344 | Caci_4607 | KEGG: sco:SCO3902 integral membrane protein. | KEGG: sma:SAV_6169 hypothetical protein. | 0.614 |
Caci_1324 | Caci_3685 | PFAM: protein of unknown function UPF0099; KEGG: sco:SCO6046 hypothetical protein. | KEGG: mgi:Mflv_0993 hypothetical protein. | 0.565 |
Caci_1912 | Caci_3685 | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | KEGG: mgi:Mflv_0993 hypothetical protein. | 0.547 |
Caci_3150 | Caci_3685 | PFAM: protein of unknown function DUF690; KEGG: saq:Sare_0941 hypothetical protein. | KEGG: mgi:Mflv_0993 hypothetical protein. | 0.430 |
Caci_3685 | Caci_0055 | KEGG: mgi:Mflv_0993 hypothetical protein. | PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sma:SAV_4367 hypothetical protein. | 0.551 |
Caci_3685 | Caci_0344 | KEGG: mgi:Mflv_0993 hypothetical protein. | KEGG: sco:SCO3902 integral membrane protein. | 0.425 |
Caci_3685 | Caci_1324 | KEGG: mgi:Mflv_0993 hypothetical protein. | PFAM: protein of unknown function UPF0099; KEGG: sco:SCO6046 hypothetical protein. | 0.565 |
Caci_3685 | Caci_1912 | KEGG: mgi:Mflv_0993 hypothetical protein. | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | 0.547 |
Caci_3685 | Caci_3150 | KEGG: mgi:Mflv_0993 hypothetical protein. | PFAM: protein of unknown function DUF690; KEGG: saq:Sare_0941 hypothetical protein. | 0.430 |
Caci_3685 | Caci_3686 | KEGG: mgi:Mflv_0993 hypothetical protein. | PFAM: glycosyl transferase family 2; KEGG: sen:SACE_6097 putative glycosyl transferase. | 0.576 |
Caci_3685 | Caci_4607 | KEGG: mgi:Mflv_0993 hypothetical protein. | KEGG: sma:SAV_6169 hypothetical protein. | 0.503 |
Caci_3685 | Caci_6077 | KEGG: mgi:Mflv_0993 hypothetical protein. | KEGG: sma:SAV_6064 hypothetical protein. | 0.495 |
Caci_3685 | Caci_7119 | KEGG: mgi:Mflv_0993 hypothetical protein. | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mav:MAV_0673 cell envelope-related function transcriptional attenuator domain protein. | 0.495 |
Caci_3685 | Caci_8771 | KEGG: mgi:Mflv_0993 hypothetical protein. | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | 0.464 |
Caci_3686 | Caci_3685 | PFAM: glycosyl transferase family 2; KEGG: sen:SACE_6097 putative glycosyl transferase. | KEGG: mgi:Mflv_0993 hypothetical protein. | 0.576 |
Caci_4607 | Caci_0344 | KEGG: sma:SAV_6169 hypothetical protein. | KEGG: sco:SCO3902 integral membrane protein. | 0.614 |
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