STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_5229PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rxy:Rxyl_0372 short chain enoyl-CoA hydratase. (277 aa)    
Predicted Functional Partners:
Caci_1224
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; dihydrodipicolinate reductase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sco:SCO5385 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.903
Caci_4117
GAF sensor hybrid histidine kinase; KEGG: sma:SAV_1085 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein.
  
 
 0.880
Caci_3328
GAF sensor hybrid histidine kinase; KEGG: sma:SAV_1085 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein.
  
 
 0.879
Caci_0144
GAF sensor hybrid histidine kinase; KEGG: sgr:SGR_1773 putative two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein.
   
 
 0.877
Caci_7013
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase NAD-binding; 3- hydroxyacyl-CoA dehydrogenase domain protein; KEGG: hau:Haur_3968 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.865
Caci_7440
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sgr:SGR_5942 putative 3-hydroxyacyl-CoA dehydrogenase.
 
 0.853
Caci_3763
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: fre:Franean1_2189 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.834
Caci_4529
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: fre:Franean1_2189 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.805
Caci_2596
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bte:BTH_II1669 polyketide biosynthesis enoyl- CoA hydratase.
  
     0.712
Caci_6184
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: dar:Daro_0372 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.646
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.